CDS

Accession Number TCMCG017C19183
gbkey CDS
Protein Id OMO85942.1
Location join(48807..48826,49093..49732,51547..51860,52092..52203,52296..52532,52621..52716)
GeneID InterPro:IPR014710
Organism Corchorus olitorius
locus_tag COLO4_21371

Protein

Length 472aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01017650.1
Definition RmlC-like jelly roll [Corchorus olitorius]
Locus_tag COLO4_21371

EGGNOG-MAPPER Annotation

COG_category P
Description cyclic nucleotide-gated ion channel
KEGG_TC 1.A.1.5
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04040        [VIEW IN KEGG]
KEGG_ko ko:K05391        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04626        [VIEW IN KEGG]
map04626        [VIEW IN KEGG]
GOs GO:0002376        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005216        [VIEW IN EMBL-EBI]
GO:0005217        [VIEW IN EMBL-EBI]
GO:0005221        [VIEW IN EMBL-EBI]
GO:0005222        [VIEW IN EMBL-EBI]
GO:0005242        [VIEW IN EMBL-EBI]
GO:0005244        [VIEW IN EMBL-EBI]
GO:0005249        [VIEW IN EMBL-EBI]
GO:0005261        [VIEW IN EMBL-EBI]
GO:0005262        [VIEW IN EMBL-EBI]
GO:0005267        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005516        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005887        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006811        [VIEW IN EMBL-EBI]
GO:0006812        [VIEW IN EMBL-EBI]
GO:0006813        [VIEW IN EMBL-EBI]
GO:0006816        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007263        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008219        [VIEW IN EMBL-EBI]
GO:0008324        [VIEW IN EMBL-EBI]
GO:0009626        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012501        [VIEW IN EMBL-EBI]
GO:0015075        [VIEW IN EMBL-EBI]
GO:0015077        [VIEW IN EMBL-EBI]
GO:0015079        [VIEW IN EMBL-EBI]
GO:0015085        [VIEW IN EMBL-EBI]
GO:0015267        [VIEW IN EMBL-EBI]
GO:0015276        [VIEW IN EMBL-EBI]
GO:0015318        [VIEW IN EMBL-EBI]
GO:0015672        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0019932        [VIEW IN EMBL-EBI]
GO:0022803        [VIEW IN EMBL-EBI]
GO:0022832        [VIEW IN EMBL-EBI]
GO:0022834        [VIEW IN EMBL-EBI]
GO:0022836        [VIEW IN EMBL-EBI]
GO:0022838        [VIEW IN EMBL-EBI]
GO:0022839        [VIEW IN EMBL-EBI]
GO:0022843        [VIEW IN EMBL-EBI]
GO:0022857        [VIEW IN EMBL-EBI]
GO:0022890        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030001        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034050        [VIEW IN EMBL-EBI]
GO:0034220        [VIEW IN EMBL-EBI]
GO:0035556        [VIEW IN EMBL-EBI]
GO:0042391        [VIEW IN EMBL-EBI]
GO:0043855        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0046873        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070509        [VIEW IN EMBL-EBI]
GO:0070588        [VIEW IN EMBL-EBI]
GO:0070838        [VIEW IN EMBL-EBI]
GO:0071804        [VIEW IN EMBL-EBI]
GO:0071805        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0072511        [VIEW IN EMBL-EBI]
GO:0098655        [VIEW IN EMBL-EBI]
GO:0098660        [VIEW IN EMBL-EBI]
GO:0098662        [VIEW IN EMBL-EBI]
GO:0099094        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCGTCTCCGTTCCCCAGGTGGTTTGGAGTAGCAAGAACCTGGGGTTCAAGGAATGAAAGCAGGAGCAGTAGTGAGCAAGATGGGCCAATTTCCAACTCTATTGAATGCTATGCATGCACTCAAGTTGGGGTTCCAGTTTTCCATTCCACCAGCTGTGACAGTGTCCATCAACCTCAATGGGAAGCTTTTGCCGGCTCCTCATTGTTCCCGGTCCAGGCTCCACCCGATTCATCTAAGAGTTCGACCCGGGCCCGATCAAGGTATTCCTCATCATCAGGCCCGTTTGGGAAGATCCTGGATCCACGTAGTGGGTTAGTTCAGAGGTGGAACCGGGTCCTCTTGGTGGCACGTGGCATTGCCTTGGCCGTTGATCCTTTGTTCTTTTACACGCTGACTTTGATCGCAAGCAAAGGTGGGGCGCCGTGTGTCTACTTGGATGGCGGGTTGGCCGCGATCGTGACCGTTGTTCGCACGTGTGTGGATGGTGTGCACTTATGGCATCTATGGCTTCAGTTCAGGTTGGCATACGTGTCCAAGGAGTCATTGGTTGTTGGATGCGGTAAACTCGTGTGGGACGCACGTGCCATTGCCTCGCACTATGTGAGATCACTTAAAGGGTTCTGGTTTGATGTTTTTGTCATACTTCCTGCTCCTCAGGTTACTGGAGGATGCTGGTATGTCCTAGCAACACAGCGTGTTGTTACATGCCTCCGGCAACAATGTGAAAGAAGTGCTTATTGTGATCCATCTTCCTCTTGCTCACAAAGGGTATGCAGTCAGCATCTTTCACCAGATAATGTGTTAAGCAGTCAATGTGGAGGGAACTCAACAACAATGACTAAGTCATTTTGCTTTGATCCGGAGGGTCCATTCCGCTATGGGATCTATGGAACTGCCCTTCCAGTCATTTCTAGCAATTCTCTGGCAGTTAAGATTCTTTATCCCATTTTTTGGGGATTATTGAATCTAAGCACATTTGGGAATGCACTTAGCCCTACAAGTGACCCTTTAGAAGTGGTATTCAGCATTTGCATTGTCCTTGGAGGCTTACTTCTTTTCACTCTATTGATTGGAAACATACAGGTATTTTTACACGTTGTCATGGCAAACAGGAAAAATATGCAGTTAAGGCACCGGGATGTTGAATGGTGGATGAGGAGGAGGCAGTTGCCTTCTGGTTTAAGGCAAAGAGTACGCCATTTCGAATCCCAAACATGGGATAAAATGGGAGGAGAGGAAGAGATGAAATGGATTGAAGAGCTCCCTGAAGGGCTCCGGAGGGACATTAAGCGCTATCTTTGCCTTGACTTGATCAAAAAGGTACCACTTTTCCATAGCTTAGATGACCTAATTCTTGACAACATATGCGACCGCATCAAGCCTCTAATTTACTCCAATGATGAAAAGGTAATGTAG
Protein:  
MPSPFPRWFGVARTWGSRNESRSSSEQDGPISNSIECYACTQVGVPVFHSTSCDSVHQPQWEAFAGSSLFPVQAPPDSSKSSTRARSRYSSSSGPFGKILDPRSGLVQRWNRVLLVARGIALAVDPLFFYTLTLIASKGGAPCVYLDGGLAAIVTVVRTCVDGVHLWHLWLQFRLAYVSKESLVVGCGKLVWDARAIASHYVRSLKGFWFDVFVILPAPQVTGGCWYVLATQRVVTCLRQQCERSAYCDPSSSCSQRVCSQHLSPDNVLSSQCGGNSTTMTKSFCFDPEGPFRYGIYGTALPVISSNSLAVKILYPIFWGLLNLSTFGNALSPTSDPLEVVFSICIVLGGLLLFTLLIGNIQVFLHVVMANRKNMQLRHRDVEWWMRRRQLPSGLRQRVRHFESQTWDKMGGEEEMKWIEELPEGLRRDIKRYLCLDLIKKVPLFHSLDDLILDNICDRIKPLIYSNDEKVM